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SRX26301110: water-bioglea metagenome
1 ILLUMINA (Illumina MiSeq) run: 35,083 spots, 21.1M bases, 11.5Mb downloads

Design: Amplifcation of the variable V3-V4 region of 16S rRNA fragment using fusion primers U341F-MiSeq and 805R-MiSeq was perfomed. The purified PCR products V3-V4 used as templates for a next step PCR to include the indexes and the Illumina adaptors. The combinatorial use of index primers generated unique samples that were pooled and sequenced on one Illumina MiSeq run.
Submitted by: Laboratory of Biotechnology and Bio-Geo resources Valorization
Study: Cyanobacteria drive the bacterial community of the hydro-thermal pool of Ksar Ghilane, Tunisia
show Abstracthide Abstract
Hot springs, often characterized by high temperatures and unique chemical compositions, create extreme environments that are challenging for many organisms to survive in. Aquatic ecosystems are shaped by complicated interactions between photosynthetic prokaryotes and heterotrophic bacteria within their phycosphere. Hence, monitoring and understanding the dynamics of these microorganisms in aquatic systems are crucial for maintaining ecosystem health. I this work, the structural diversity of bacterial communities associated with cyanobacterial cultures collected from the hydrothermal pool in the Ksar Ghilane oasis in Tunisia was investigated using High-throughput sequencing. The obtained results highlight the diversity of cyanosphere Cyanobacteria-mediated and the complexity of interactions occurring between autotrophs and heterotrophs in springs.
Sample: BD16 ksar Guilane
SAMN42145605 • SRS21842004 • All experiments • All runs
Library:
Name: LK1
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 35,083 spots, 21.1M bases, 11.5Mb
Run# of Spots# of BasesSizePublished
SRR3089760335,08321.1M11.5Mb2024-10-06

ID:
35509957

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